Analysis of Ligand-Protein Contacts in PDB entry:
5NES


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5NES. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DCY
E
1 6D-CYSTEINE
lig 2
DTR
E
3 14D-TRYPTOPHAN
lig 3
DLY
E
5 5D-LYSINE
lig 4
DLY
E
7 5D-LYSINE
lig 5
DTR
E
9 14D-TRYPTOPHAN
lig 6
DCY
E
11 6D-CYSTEINE
lig 7
CA
A
301 1CALCIUM ION
lig 8
CA
A
302 1CALCIUM ION
lig 9
CA
A
303 1CALCIUM ION
lig 10
ZDC
A
304 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 11
ZDC
A
305 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 12
8VH
E
101 81,3-DIMETHYLBENZENE
lig 13
ZDC
B
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 14
CA
B
202 1CALCIUM ION
lig 15
CA
B
203 1CALCIUM ION
lig 16
CA
B
204 1CALCIUM ION
lig 17
ZDC
B
205 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 18
CA
C
201 1CALCIUM ION
lig 19
CA
D
201 1CALCIUM ION