Analysis of Ligand-Protein Contacts in PDB entry:
5NEY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 5NEY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DTR
E
2 14D-TRYPTOPHAN
lig 2
DLY
E
4 5D-LYSINE
lig 3
DLY
E
6 5D-LYSINE
lig 4
DLY
E
8 9D-LYSINE
lig 5
DTR
E
10 10D-TRYPTOPHAN
lig 6
ZDC
A
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 7
CA
A
202 1CALCIUM ION
lig 8
CA
A
203 1CALCIUM ION
lig 9
CA
B
301 1CALCIUM ION
lig 10
CA
B
302 1CALCIUM ION
lig 11
ZDC
C
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 12
CA
C
202 1CALCIUM ION
lig 13
CA
C
203 1CALCIUM ION
lig 14
ZDC
D
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 15
CA
D
202 1CALCIUM ION
lig 16
CA
D
203 1CALCIUM ION
lig 17
ZDC
E
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 18
OXE
E
202 8ORTHO-XYLENE