Analysis of Ligand-Protein Contacts in PDB entry:
5NIT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5NIT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
FAD
A
601 53FLAVIN-ADENINE DINUCLEOTIDE
lig 6
OXY
A
602 2OXYGEN MOLECULE
lig 7
NAG
A
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
DIO
A
610 61,4-DIETHYLENE DIOXIDE
lig 11
DIO
A
611 61,4-DIETHYLENE DIOXIDE
lig 12
DIO
A
612 61,4-DIETHYLENE DIOXIDE
lig 13
DIO
A
613 61,4-DIETHYLENE DIOXIDE
lig 14
DIO
A
614 61,4-DIETHYLENE DIOXIDE
lig 15
DIO
A
615 61,4-DIETHYLENE DIOXIDE
lig 16
DIO
A
616 61,4-DIETHYLENE DIOXIDE
lig 17
DIO
A
617 61,4-DIETHYLENE DIOXIDE
lig 18
DIO
A
618 61,4-DIETHYLENE DIOXIDE
lig 19
DIO
A
619 61,4-DIETHYLENE DIOXIDE
lig 20
DIO
A
620 61,4-DIETHYLENE DIOXIDE
lig 21
DIO
A
621 61,4-DIETHYLENE DIOXIDE
lig 22
DIO
A
622 61,4-DIETHYLENE DIOXIDE
lig 23
DIO
A
623 61,4-DIETHYLENE DIOXIDE
lig 24
DIO
A
624 61,4-DIETHYLENE DIOXIDE
lig 25
DIO
A
625 61,4-DIETHYLENE DIOXIDE
lig 26
DIO
A
626 61,4-DIETHYLENE DIOXIDE
lig 27
DIO
A
627 61,4-DIETHYLENE DIOXIDE
lig 28
EPE
A
628 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF