Analysis of Ligand-Protein Contacts in PDB entry:
5NLO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5NLO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HIC
A
1 114-METHYL-HISTIDINE
lig 2
XYP
B
1 10BETA-D-XYLOPYRANOSE
lig 3
XYP
B
2 9BETA-D-XYLOPYRANOSE
lig 4
XYP
B
3 9BETA-D-XYLOPYRANOSE
lig 5
XYP
B
4 9BETA-D-XYLOPYRANOSE
lig 6
XYP
B
5 9BETA-D-XYLOPYRANOSE
lig 7
CU
A
301 1COPPER (II) ION
lig 8
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
304 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
CL
A
305 1CHLORIDE ION
lig 12
CL
A
306 1CHLORIDE ION
lig 13
CL
A
307 1CHLORIDE ION
lig 14
CL
A
308 1CHLORIDE ION
lig 15
CL
A
309 1CHLORIDE ION
lig 16
CL
A
311 1CHLORIDE ION
lig 17
CL
A
313 1CHLORIDE ION