Analysis of Ligand-Protein Contacts in PDB entry:
5NLP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 5NLP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HIC
A
1 114-METHYL-HISTIDINE
lig 2
XYP
B
1 10BETA-D-XYLOPYRANOSE
lig 3
XYP
B
2 9BETA-D-XYLOPYRANOSE
lig 4
XYP
B
3 9BETA-D-XYLOPYRANOSE
lig 5
XYS
C
1 10ALPHA-D-XYLOPYRANOSE
lig 6
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 7
CU
A
301 1COPPER (II) ION
lig 8
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
XYP
A
303 10BETA-D-XYLOPYRANOSE