Analysis of Ligand-Protein Contacts in PDB entry:
5NMI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5NMI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HEM
C
501 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
HEM
C
502 43PROTOPORPHYRIN IX CONTAINING FE
lig 3
MJM
C
503 25 TETRAHYDROQUINOLIN-4(4AH)-ONE
lig 4
PEE
C
504 281,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 5
CDL
C
505 42CARDIOLIPIN
lig 6
CDL
C
506 37CARDIOLIPIN
lig 7
HEC
D
501 43HEME C
lig 8
PEE
D
502 421,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 9
CDL
D
503 44CARDIOLIPIN
lig 10
FES
E
501 4FE2/S2 (INORGANIC) CLUSTER
lig 11
PEE
E
502 291,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 12
CDL
P
401 42CARDIOLIPIN
lig 13
HEM
P
402 43PROTOPORPHYRIN IX CONTAINING FE
lig 14
HEM
P
403 43PROTOPORPHYRIN IX CONTAINING FE
lig 15
MJM
P
404 25 TETRAHYDROQUINOLIN-4(4AH)-ONE
lig 16
PEE
P
405 381,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 17
CDL
P
406 46CARDIOLIPIN
lig 18
CDL
P
407 38CARDIOLIPIN
lig 19
HEC
Q
501 43HEME C
lig 20
PEE
R
201 341,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM
lig 21
PEE
R
202 241,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAM