Analysis of Ligand-Protein Contacts in PDB entry:
5NMO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 5NMO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
1101 5SULFATE ION
lig 2
SO4
A
1102 5SULFATE ION
lig 3
SO4
A
1103 5SULFATE ION
lig 4
SO4
A
1104 5SULFATE ION
lig 5
SO4
A
1105 5SULFATE ION
lig 6
SO4
A
1106 5SULFATE ION
lig 7
SO4
A
1107 5SULFATE ION
lig 8
MPD
A
1108 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 9
PEG
A
1109 7DI(HYDROXYETHYL)ETHER
lig 10
PEG
A
1110 7DI(HYDROXYETHYL)ETHER
lig 11
EDO
A
1111 41,2-ETHANEDIOL
lig 12
EDO
A
1112 41,2-ETHANEDIOL
lig 13
EDO
A
1113 41,2-ETHANEDIOL
lig 14
EDO
A
1114 41,2-ETHANEDIOL
lig 15
SO4
B
1101 5SULFATE ION
lig 16
SO4
B
1102 5SULFATE ION
lig 17
SO4
B
1103 5SULFATE ION
lig 18
MPD
B
1104 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 19
PEG
B
1105 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
B
1106 7DI(HYDROXYETHYL)ETHER
lig 21
EDO
B
1107 41,2-ETHANEDIOL
lig 22
EDO
B
1108 41,2-ETHANEDIOL
lig 23
EDO
B
1109 41,2-ETHANEDIOL