Analysis of Ligand-Protein Contacts in PDB entry:
5NN0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 5NN0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
B
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
C
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
D
3 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
GOL
A
612 6GLYCEROL
lig 13
GOL
A
613 6GLYCEROL
lig 14
SO4
A
614 5SULFATE ION
lig 15
SO4
A
615 5SULFATE ION
lig 16
SO4
A
616 5SULFATE ION
lig 17
SO4
A
617 5SULFATE ION
lig 18
SO4
A
618 5SULFATE ION
lig 19
SO4
A
619 5SULFATE ION
lig 20
SO4
A
620 5SULFATE ION
lig 21
CL
A
621 1CHLORIDE ION
lig 22
CL
A
622 1CHLORIDE ION
lig 23
CL
A
623 1CHLORIDE ION
lig 24
MES
A
624 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 25
MES
A
625 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 26
92H
A
626 34 ETHYL]NAPHTHALENE-2-CARBOXAMIDE
lig 27
92H
A
627 34 ETHYL]NAPHTHALENE-2-CARBOXAMIDE
lig 28
1PG
A
628 17 ETHANOL
lig 29
PEG
A
629 7DI(HYDROXYETHYL)ETHER