Analysis of Ligand-Protein Contacts in PDB entry:
5NND

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.

There are 7 ligands in PDB entry 5NND. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	ALY	D	9	12	N(6)-ACETYLLYSINE
lig 2	SEP	D	10	10	PHOSPHOSERINE
lig 3	ALY	D	14	12	N(6)-ACETYLLYSINE
lig 4	ALY	E	9	12	N(6)-ACETYLLYSINE
lig 5	SEP	E	10	10	PHOSPHOSERINE
lig 6	ALY	E	14	12	N(6)-ACETYLLYSINE
lig 7	EDO	A	201	4	1,2-ETHANEDIOL

Analysis of Ligand-Protein Contacts in PDB entry: 5NND

Analysis of Ligand-Protein Contacts in PDB entry:
5NND