Analysis of Ligand-Protein Contacts in PDB entry:
5NQ7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5NQ7. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
BMA
B
6 11BETA-D-MANNOPYRANOSE
lig 7
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 10
BMA
C
4 10BETA-D-MANNOPYRANOSE
lig 11
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 12
BMA
C
6 11BETA-D-MANNOPYRANOSE
lig 13
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 17
CU
A
617 1COPPER (II) ION
lig 18
CU
A
618 1COPPER (II) ION
lig 19
CU
A
619 1COPPER (II) ION
lig 20
CU
A
620 1COPPER (II) ION
lig 21
PER
A
621 2PEROXIDE ION