Analysis of Ligand-Protein Contacts in PDB entry:
5NQ8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5NQ8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
CU
A
601 1COPPER (II) ION
lig 8
CU
A
602 1COPPER (II) ION
lig 9
CU
A
603 1COPPER (II) ION
lig 10
CU
A
604 1COPPER (II) ION
lig 11
PER
A
605 2PEROXIDE ION
lig 12
ME2
A
612 101-ETHOXY-2-(2-METHOXYETHOXY)ETHANE
lig 13
ME2
A
613 101-ETHOXY-2-(2-METHOXYETHOXY)ETHANE
lig 14
IPH
A
614 7PHENOL
lig 15
NA
A
615 1SODIUM ION
lig 16
NA
A
616 1SODIUM ION
lig 17
MLI
A
617 7MALONATE ION
lig 18
MLI
A
618 7MALONATE ION
lig 19
MLI
A
619 7MALONATE ION