Analysis of Ligand-Protein Contacts in PDB entry:
5NZ4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5NZ4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 9
CA
A
501 1CALCIUM ION
lig 10
CA
A
502 1CALCIUM ION
lig 11
G39
A
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 12
NAG
A
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
EDO
A
509 41,2-ETHANEDIOL
lig 14
EDO
A
510 41,2-ETHANEDIOL
lig 15
EDO
A
511 41,2-ETHANEDIOL
lig 16
EDO
A
512 41,2-ETHANEDIOL
lig 17
EDO
A
513 41,2-ETHANEDIOL
lig 18
EDO
A
514 41,2-ETHANEDIOL
lig 19
EDO
A
515 41,2-ETHANEDIOL
lig 20
CA
B
501 1CALCIUM ION
lig 21
CA
B
502 1CALCIUM ION
lig 22
G39
B
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 23
NAG
B
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
B
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
CA
B
510 1CALCIUM ION
lig 26
EDO
B
511 41,2-ETHANEDIOL
lig 27
EDO
B
512 41,2-ETHANEDIOL
lig 28
EDO
B
513 41,2-ETHANEDIOL