Analysis of Ligand-Protein Contacts in PDB entry:
5NZD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5NZD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CBV
A
2 225-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 2
CBV
A
39 225-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 3
CBV
B
2 225-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 4
CBV
B
39 225-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE)
lig 5
MG
A
101 1MAGNESIUM ION
lig 6
MG
A
102 1MAGNESIUM ION
lig 7
MG
A
103 1MAGNESIUM ION
lig 8
MG
A
104 1MAGNESIUM ION
lig 9
MG
A
105 1MAGNESIUM ION
lig 10
NA
A
106 1SODIUM ION
lig 11
NA
A
107 1SODIUM ION
lig 12
ACT
A
108 4ACETATE ION
lig 13
MG
B
101 1MAGNESIUM ION
lig 14
MG
B
102 1MAGNESIUM ION
lig 15
MG
B
103 1MAGNESIUM ION
lig 16
MG
B
104 1MAGNESIUM ION
lig 17
ACT
B
105 4ACETATE ION