Analysis of Ligand-Protein Contacts in PDB entry:
5NZE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 29 ligands in PDB entry 5NZE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
CA
A
501 1CALCIUM ION
lig 6
CA
A
502 1CALCIUM ION
lig 7
G39
A
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 8
NAG
A
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
A
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
EDO
A
507 41,2-ETHANEDIOL
lig 12
EDO
A
508 41,2-ETHANEDIOL
lig 13
EDO
A
509 41,2-ETHANEDIOL
lig 14
EDO
A
510 41,2-ETHANEDIOL
lig 15
EDO
A
511 41,2-ETHANEDIOL
lig 16
EDO
A
512 41,2-ETHANEDIOL
lig 17
EDO
A
513 41,2-ETHANEDIOL
lig 18
EDO
A
514 41,2-ETHANEDIOL
lig 19
CA
A
515 1CALCIUM ION
lig 20
CA
B
501 1CALCIUM ION
lig 21
CA
B
502 1CALCIUM ION
lig 22
G39
B
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 23
NAG
B
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
EDO
B
509 41,2-ETHANEDIOL
lig 25
EDO
B
510 41,2-ETHANEDIOL
lig 26
EDO
B
511 41,2-ETHANEDIOL
lig 27
EDO
B
512 41,2-ETHANEDIOL
lig 28
EDO
B
513 41,2-ETHANEDIOL
lig 29
EDO
B
514 41,2-ETHANEDIOL