Analysis of Ligand-Protein Contacts in PDB entry:
5NZF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 41 ligands in PDB entry 5NZF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
CA
A
501 1CALCIUM ION
lig 9
CA
A
502 1CALCIUM ION
lig 10
G39
A
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 11
NAG
A
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
CA
A
506 1CALCIUM ION
lig 14
CA
B
501 1CALCIUM ION
lig 15
CA
B
502 1CALCIUM ION
lig 16
G39
B
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 17
NAG
B
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
B
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
B
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
EDO
B
507 41,2-ETHANEDIOL
lig 21
EDO
B
508 41,2-ETHANEDIOL
lig 22
EDO
B
509 41,2-ETHANEDIOL
lig 23
CA
C
501 1CALCIUM ION
lig 24
CA
C
502 1CALCIUM ION
lig 25
G39
C
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 26
NAG
C
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
C
510 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
EDO
C
511 41,2-ETHANEDIOL
lig 29
EDO
C
512 41,2-ETHANEDIOL
lig 30
CA
D
501 1CALCIUM ION
lig 31
CA
D
502 1CALCIUM ION
lig 32
G39
D
503 20 CYCLOHEX-1-ENE-1-CARBOXYLIC ACID
lig 33
NAG
D
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
D
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
EDO
D
508 41,2-ETHANEDIOL
lig 36
EDO
D
509 41,2-ETHANEDIOL
lig 37
EDO
D
510 41,2-ETHANEDIOL
lig 38
EDO
D
511 41,2-ETHANEDIOL
lig 39
EDO
D
512 41,2-ETHANEDIOL
lig 40
EDO
D
513 41,2-ETHANEDIOL
lig 41
NA
D
514 1SODIUM ION