Analysis of Ligand-Protein Contacts in PDB entry:
5OBG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 54 ligands in PDB entry 5OBG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SY9
A
601 25STRYCHNINE
lig 2
EDO
A
602 41,2-ETHANEDIOL
lig 3
EDO
A
603 41,2-ETHANEDIOL
lig 4
EDO
A
604 41,2-ETHANEDIOL
lig 5
EDO
A
605 41,2-ETHANEDIOL
lig 6
NA
A
606 1SODIUM ION
lig 7
ACT
A
607 4ACETATE ION
lig 8
EDO
A
608 41,2-ETHANEDIOL
lig 9
EDO
A
609 41,2-ETHANEDIOL
lig 10
ACT
A
610 4ACETATE ION
lig 11
EDO
A
611 41,2-ETHANEDIOL
lig 12
SY9
B
601 25STRYCHNINE
lig 13
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
EDO
B
603 41,2-ETHANEDIOL
lig 15
EDO
B
604 41,2-ETHANEDIOL
lig 16
EDO
B
605 41,2-ETHANEDIOL
lig 17
EDO
B
606 41,2-ETHANEDIOL
lig 18
NA
B
607 1SODIUM ION
lig 19
ACT
B
608 4ACETATE ION
lig 20
EDO
B
609 41,2-ETHANEDIOL
lig 21
EDO
B
610 41,2-ETHANEDIOL
lig 22
ACT
C
603 4ACETATE ION
lig 23
EDO
C
602 41,2-ETHANEDIOL
lig 24
SY9
C
601 25STRYCHNINE
lig 25
NAG
C
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
EDO
C
605 41,2-ETHANEDIOL
lig 27
EDO
C
606 41,2-ETHANEDIOL
lig 28
EDO
C
607 41,2-ETHANEDIOL
lig 29
EDO
C
608 41,2-ETHANEDIOL
lig 30
NA
C
609 1SODIUM ION
lig 31
ACT
C
610 4ACETATE ION
lig 32
EDO
C
611 41,2-ETHANEDIOL
lig 33
SY9
D
601 25STRYCHNINE
lig 34
NAG
D
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
ACT
D
603 4ACETATE ION
lig 36
EDO
D
604 41,2-ETHANEDIOL
lig 37
EDO
D
605 41,2-ETHANEDIOL
lig 38
EDO
D
606 41,2-ETHANEDIOL
lig 39
EDO
D
607 41,2-ETHANEDIOL
lig 40
EDO
D
608 41,2-ETHANEDIOL
lig 41
NA
D
609 1SODIUM ION
lig 42
NA
E
604 1SODIUM ION
lig 43
ACT
E
602 4ACETATE ION
lig 44
EDO
E
603 41,2-ETHANEDIOL
lig 45
SY9
E
601 25STRYCHNINE
lig 46
NAG
E
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
ACT
E
606 4ACETATE ION
lig 48
ACT
E
607 4ACETATE ION
lig 49
EDO
E
608 41,2-ETHANEDIOL
lig 50
EDO
E
609 41,2-ETHANEDIOL
lig 51
EDO
E
610 41,2-ETHANEDIOL
lig 52
EDO
E
611 41,2-ETHANEDIOL
lig 53
EDO
E
612 41,2-ETHANEDIOL
lig 54
EDO
E
613 41,2-ETHANEDIOL