Analysis of Ligand-Protein Contacts in PDB entry:
5OYD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5OYD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NBG
C
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 2
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 3
BGC
C
3 11BETA-D-GLUCOPYRANOSE
lig 4
BGC
C
4 11BETA-D-GLUCOPYRANOSE
lig 5
XYS
C
5 9ALPHA-D-XYLOPYRANOSE
lig 6
XYS
C
6 9ALPHA-D-XYLOPYRANOSE
lig 7
NBG
D
1 15N-ACETYL-BETA-D-GLUCOPYRANOSYLAMINE
lig 8
BGC
D
2 11BETA-D-GLUCOPYRANOSE
lig 9
BGC
D
3 11BETA-D-GLUCOPYRANOSE
lig 10
BGC
D
4 11BETA-D-GLUCOPYRANOSE
lig 11
XYS
D
5 9ALPHA-D-XYLOPYRANOSE
lig 12
XYS
D
6 9ALPHA-D-XYLOPYRANOSE
lig 13
XYS
D
7 9ALPHA-D-XYLOPYRANOSE
lig 14
GOL
A
507 6GLYCEROL
lig 15
GOL
A
508 6GLYCEROL
lig 16
GOL
A
509 6GLYCEROL
lig 17
CL
A
510 1CHLORIDE ION
lig 18
GOL
B
508 6GLYCEROL
lig 19
GOL
B
509 6GLYCEROL
lig 20
CL
B
510 1CHLORIDE ION
lig 21
SO4
B
511 5SULFATE ION