Analysis of Ligand-Protein Contacts in PDB entry:
5QJ2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 5QJ2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
B
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
B
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
FUC
B
606 10ALPHA-L-FUCOPYRANOSE
lig 7
NAG
B
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
HEM
B
608 43PROTOPORPHYRIN IX CONTAINING FE
lig 9
NAG
B
609 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
B
610 11BETA-D-MANNOPYRANOSE
lig 11
MAN
B
611 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
B
612 11ALPHA-D-MANNOPYRANOSE
lig 13
JXS
B
613 24 2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
lig 14
CA
B
614 1CALCIUM ION
lig 15
CL
B
615 1CHLORIDE ION
lig 16
BMA
E
601 11BETA-D-MANNOPYRANOSE
lig 17
MAN
E
602 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
E
603 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
E
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
E
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
E
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
E
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
FUC
E
608 10ALPHA-L-FUCOPYRANOSE
lig 24
HEM
E
609 43PROTOPORPHYRIN IX CONTAINING FE
lig 25
JXS
E
610 24 2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
lig 26
CA
E
611 1CALCIUM ION
lig 27
NAG
G
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
G
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
G
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
G
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
FUC
G
605 10ALPHA-L-FUCOPYRANOSE
lig 32
NAG
G
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
HEM
G
607 43PROTOPORPHYRIN IX CONTAINING FE
lig 34
NAG
G
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
G
609 11BETA-D-MANNOPYRANOSE
lig 36
MAN
G
610 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
G
611 11ALPHA-D-MANNOPYRANOSE
lig 38
JXS
G
612 24 2,3]TRIAZOLO[4,5-B]PYRIDIN-5-AMINE
lig 39
CA
G
613 1CALCIUM ION
lig 40
CL
G
614 1CHLORIDE ION
lig 41
NAG
I
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
I
602 11BETA-D-MANNOPYRANOSE
lig 43
MAN
I
603 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
I
604 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
I
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
I
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
I
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
I
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
FUC
I
609 10ALPHA-L-FUCOPYRANOSE
lig 50
HEM
I
610 43PROTOPORPHYRIN IX CONTAINING FE
lig 51
CA
I
611 1CALCIUM ION