Analysis of Ligand-Protein Contacts in PDB entry:
5QTP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5QTP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
301 1MAGNESIUM ION
lig 2
MG
A
302 1MAGNESIUM ION
lig 3
PWJ
A
303 16 CARBONITRILE
lig 4
EDO
A
304 41,2-ETHANEDIOL
lig 5
EDO
A
305 41,2-ETHANEDIOL
lig 6
CL
B
301 1CHLORIDE ION
lig 7
EDO
B
302 41,2-ETHANEDIOL
lig 8
MG
B
303 1MAGNESIUM ION
lig 9
MG
B
304 1MAGNESIUM ION
lig 10
PWJ
B
305 16 CARBONITRILE
lig 11
EDO
B
306 41,2-ETHANEDIOL
lig 12
EDO
C
301 41,2-ETHANEDIOL
lig 13
MG
C
302 1MAGNESIUM ION
lig 14
MG
C
303 1MAGNESIUM ION
lig 15
EDO
C
304 41,2-ETHANEDIOL
lig 16
EDO
C
305 41,2-ETHANEDIOL
lig 17
PWJ
C
306 16 CARBONITRILE
lig 18
PWJ
D
501 16 CARBONITRILE
lig 19
MG
D
502 1MAGNESIUM ION
lig 20
MG
D
503 1MAGNESIUM ION
lig 21
EDO
D
504 41,2-ETHANEDIOL