Analysis of Ligand-Protein Contacts in PDB entry:
5S9M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5S9M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
B
9 11ALPHA-D-MANNOPYRANOSE
lig 10
YV1
A
901 33 D]AZEPINE-6(1H)-CARBOXYLATE
lig 11
ACT
A
902 4ACETATE ION
lig 12
ACT
A
903 4ACETATE ION
lig 13
ACT
A
904 4ACETATE ION
lig 14
PG4
A
905 10TETRAETHYLENE GLYCOL
lig 15
PG4
A
906 13TETRAETHYLENE GLYCOL
lig 16
ZN
A
907 1ZINC ION
lig 17
ZN
A
908 1ZINC ION
lig 18
CA
A
909 1CALCIUM ION
lig 19
CA
A
910 1CALCIUM ION
lig 20
CA
A
911 1CALCIUM ION
lig 21
CL
A
912 1CHLORIDE ION
lig 22
NA
A
913 1SODIUM ION