Analysis of Ligand-Protein Contacts in PDB entry:
5SKF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 5SKF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CME
A
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 2
CME
B
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 3
CME
C
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 4
CME
D
509 10S,S-(2-HYDROXYETHYL)THIOCYSTEINE
lig 5
ZN
A
801 1ZINC ION
lig 6
MG
A
802 1MAGNESIUM ION
lig 7
CL
A
803 1CHLORIDE ION
lig 8
GOL
A
804 6GLYCEROL
lig 9
KF9
A
805 31 4-DIHYDROPYRIDAZIN-3-YL]-1H-PYRAZOL-1-YL}
lig 10
ZN
B
801 1ZINC ION
lig 11
MG
B
802 1MAGNESIUM ION
lig 12
PR
B
803 1PRASEODYMIUM ION
lig 13
PR
B
804 1PRASEODYMIUM ION
lig 14
PR
B
805 1PRASEODYMIUM ION
lig 15
PR
B
806 1PRASEODYMIUM ION
lig 16
PR
B
807 1PRASEODYMIUM ION
lig 17
KF9
B
808 31 4-DIHYDROPYRIDAZIN-3-YL]-1H-PYRAZOL-1-YL}
lig 18
ZN
C
801 1ZINC ION
lig 19
MG
C
802 1MAGNESIUM ION
lig 20
PR
C
803 1PRASEODYMIUM ION
lig 21
PR
C
804 1PRASEODYMIUM ION
lig 22
PR
C
805 1PRASEODYMIUM ION
lig 23
KF9
C
806 31 4-DIHYDROPYRIDAZIN-3-YL]-1H-PYRAZOL-1-YL}
lig 24
ZN
D
801 1ZINC ION
lig 25
MG
D
802 1MAGNESIUM ION
lig 26
KF9
D
803 31 4-DIHYDROPYRIDAZIN-3-YL]-1H-PYRAZOL-1-YL}