Analysis of Ligand-Protein Contacts in PDB entry:
5SWP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 5SWP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
7 10PHOSPHOSERINE
lig 2
SEP
A
790 10PHOSPHOSERINE
lig 3
70W
A
1101 14TERT-BUTYL 4-AMINOPIPERIDINE-1-CARBOXYLATE
lig 4
70W
A
1102 14TERT-BUTYL 4-AMINOPIPERIDINE-1-CARBOXYLATE
lig 5
70V
A
1103 92-METHYLCYCLOHEXANE-1,3-DIONE
lig 6
CL
A
1104 1CHLORIDE ION
lig 7
70V
B
701 92-METHYLCYCLOHEXANE-1,3-DIONE