Analysis of Ligand-Protein Contacts in PDB entry:
5T05


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 54 ligands in PDB entry 5T05. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BDP
C
1 12BETA-D-GLUCOPYRANURONIC ACID
lig 2
GNS
C
2 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 3
IDS
C
3 162-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID
lig 4
GNS
C
4 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 5
BDP
C
5 12BETA-D-GLUCOPYRANURONIC ACID
lig 6
GNS
C
6 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 7
GLC
D
1 12ALPHA-D-GLUCOPYRANOSE
lig 8
GLC
D
2 11ALPHA-D-GLUCOPYRANOSE
lig 9
GLC
D
3 11ALPHA-D-GLUCOPYRANOSE
lig 10
GLC
D
4 11ALPHA-D-GLUCOPYRANOSE
lig 11
BDP
E
1 12BETA-D-GLUCOPYRANURONIC ACID
lig 12
GNS
E
2 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 13
IDS
E
3 162-O-SULFO-ALPHA-L-IDOPYRANURONIC ACID
lig 14
GNS
E
4 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 15
BDP
E
5 12BETA-D-GLUCOPYRANURONIC ACID
lig 16
GNS
E
6 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 17
GLC
F
1 12ALPHA-D-GLUCOPYRANOSE
lig 18
GLC
F
2 11ALPHA-D-GLUCOPYRANOSE
lig 19
GLC
F
3 11ALPHA-D-GLUCOPYRANOSE
lig 20
GLC
F
4 11ALPHA-D-GLUCOPYRANOSE
lig 21
A3P
A
1401 27ADENOSINE-3'-5'-DIPHOSPHATE
lig 22
NPO
A
1408 10P-NITROPHENOL
lig 23
EDO
A
1413 41,2-ETHANEDIOL
lig 24
EDO
A
1414 41,2-ETHANEDIOL
lig 25
EDO
A
1415 41,2-ETHANEDIOL
lig 26
EDO
A
1416 41,2-ETHANEDIOL
lig 27
EDO
A
1417 41,2-ETHANEDIOL
lig 28
EDO
A
1418 41,2-ETHANEDIOL
lig 29
EDO
A
1419 41,2-ETHANEDIOL
lig 30
EDO
A
1420 41,2-ETHANEDIOL
lig 31
EDO
A
1421 41,2-ETHANEDIOL
lig 32
CL
A
1422 1CHLORIDE ION
lig 33
CL
A
1423 1CHLORIDE ION
lig 34
CL
A
1424 1CHLORIDE ION
lig 35
NA
A
1425 1SODIUM ION
lig 36
NA
A
1426 1SODIUM ION
lig 37
NA
A
1427 1SODIUM ION
lig 38
NA
A
1428 1SODIUM ION
lig 39
NA
A
1429 1SODIUM ION
lig 40
TLA
A
1430 10L(+)-TARTARIC ACID
lig 41
TLA
A
1431 10L(+)-TARTARIC ACID
lig 42
A3P
B
1401 27ADENOSINE-3'-5'-DIPHOSPHATE
lig 43
NPO
B
1408 8P-NITROPHENOL
lig 44
EDO
B
1413 41,2-ETHANEDIOL
lig 45
EDO
B
1414 41,2-ETHANEDIOL
lig 46
EDO
B
1415 41,2-ETHANEDIOL
lig 47
EDO
B
1416 41,2-ETHANEDIOL
lig 48
EDO
B
1417 41,2-ETHANEDIOL
lig 49
EDO
B
1418 41,2-ETHANEDIOL
lig 50
CL
B
1419 1CHLORIDE ION
lig 51
NA
B
1420 1SODIUM ION
lig 52
NA
B
1421 1SODIUM ION
lig 53
TLA
B
1422 10L(+)-TARTARIC ACID
lig 54
TLA
B
1423 10L(+)-TARTARIC ACID