Analysis of Ligand-Protein Contacts in PDB entry:
5T55


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5T55. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
C
1 11BETA-D-GALACTOPYRANOSE
lig 2
NGA
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 3
BGC
D
1 12BETA-D-GLUCOPYRANOSE
lig 4
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 5
GLA
D
3 11ALPHA-D-GALACTOPYRANOSE
lig 6
NGA
D
4 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 7
CA
A
301 1CALCIUM ION
lig 8
CA
A
302 1CALCIUM ION
lig 9
EDO
A
305 41,2-ETHANEDIOL
lig 10
EDO
A
306 41,2-ETHANEDIOL
lig 11
EDO
A
307 41,2-ETHANEDIOL
lig 12
EDO
A
308 41,2-ETHANEDIOL
lig 13
EDO
A
309 41,2-ETHANEDIOL
lig 14
EDO
A
310 41,2-ETHANEDIOL
lig 15
EDO
A
311 41,2-ETHANEDIOL
lig 16
CA
B
301 1CALCIUM ION
lig 17
CA
B
302 1CALCIUM ION
lig 18
EDO
B
307 41,2-ETHANEDIOL
lig 19
EDO
B
308 41,2-ETHANEDIOL
lig 20
EDO
B
309 41,2-ETHANEDIOL
lig 21
CL
B
310 1CHLORIDE ION