Analysis of Ligand-Protein Contacts in PDB entry:
5TMA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 5TMA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPP
A
601 26THIAMINE DIPHOSPHATE
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
SO4
A
603 5SULFATE ION
lig 4
SO4
A
604 5SULFATE ION
lig 5
SO4
A
605 5SULFATE ION
lig 6
SO4
A
606 5SULFATE ION
lig 7
SO4
A
607 5SULFATE ION
lig 8
SO4
A
608 5SULFATE ION
lig 9
EDO
A
609 41,2-ETHANEDIOL
lig 10
EDO
A
610 41,2-ETHANEDIOL
lig 11
EDO
A
611 41,2-ETHANEDIOL
lig 12
EDO
A
612 41,2-ETHANEDIOL
lig 13
EDO
A
613 41,2-ETHANEDIOL
lig 14
EDO
A
614 41,2-ETHANEDIOL
lig 15
EDO
A
615 41,2-ETHANEDIOL
lig 16
EDO
A
616 41,2-ETHANEDIOL
lig 17
EDO
A
617 41,2-ETHANEDIOL
lig 18
TPP
B
601 26THIAMINE DIPHOSPHATE
lig 19
MG
B
602 1MAGNESIUM ION
lig 20
SO4
B
603 5SULFATE ION
lig 21
SO4
B
604 5SULFATE ION
lig 22
SO4
B
605 5SULFATE ION
lig 23
SO4
B
606 5SULFATE ION
lig 24
SO4
B
607 5SULFATE ION
lig 25
SO4
B
608 5SULFATE ION
lig 26
SO4
B
609 5SULFATE ION
lig 27
SO4
B
610 5SULFATE ION
lig 28
SO4
B
611 5SULFATE ION
lig 29
SO4
B
612 5SULFATE ION
lig 30
EDO
B
613 41,2-ETHANEDIOL
lig 31
EDO
B
614 41,2-ETHANEDIOL
lig 32
EDO
B
615 41,2-ETHANEDIOL
lig 33
EDO
B
616 41,2-ETHANEDIOL
lig 34
EDO
B
617 41,2-ETHANEDIOL
lig 35
EDO
B
618 41,2-ETHANEDIOL
lig 36
EDO
B
619 41,2-ETHANEDIOL
lig 37
EDO
B
620 41,2-ETHANEDIOL
lig 38
EDO
B
621 41,2-ETHANEDIOL