Analysis of Ligand-Protein Contacts in PDB entry:
5TYU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5TYU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TTP
A
501 29THYMIDINE-5'-TRIPHOSPHATE
lig 2
MN
A
503 1MANGANESE (II) ION
lig 3
MN
A
504 1MANGANESE (II) ION
lig 4
NA
A
505 1SODIUM ION
lig 5
CA
A
506 1CALCIUM ION
lig 6
DTT
A
508 12,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 7
EDO
A
509 41,2-ETHANEDIOL
lig 8
EDO
A
510 41,2-ETHANEDIOL
lig 9
EPE
A
511 54-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 10
EDO
P
102 41,2-ETHANEDIOL