Analysis of Ligand-Protein Contacts in PDB entry:
5UPM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5UPM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
BGC
B
1 12BETA-D-GLUCOPYRANOSE
lig 2
BGC
B
2 11BETA-D-GLUCOPYRANOSE
lig 3
BGC
B
3 11BETA-D-GLUCOPYRANOSE
lig 4
GLC
C
1 12ALPHA-D-GLUCOPYRANOSE
lig 5
BGC
C
2 11BETA-D-GLUCOPYRANOSE
lig 6
BGC
C
3 11BETA-D-GLUCOPYRANOSE
lig 7
BGC
D
1 12BETA-D-GLUCOPYRANOSE
lig 8
BGC
D
2 11BETA-D-GLUCOPYRANOSE
lig 9
PO4
A
801 5PHOSPHATE ION
lig 10
PO4
A
802 5PHOSPHATE ION
lig 11
PO4
A
803 5PHOSPHATE ION
lig 12
PO4
A
804 5PHOSPHATE ION
lig 13
PO4
A
805 5PHOSPHATE ION
lig 14
PO4
A
806 5PHOSPHATE ION
lig 15
PO4
A
807 5PHOSPHATE ION
lig 16
PO4
A
808 5PHOSPHATE ION
lig 17
PO4
A
809 5PHOSPHATE ION
lig 18
EDO
A
810 41,2-ETHANEDIOL
lig 19
EDO
A
811 41,2-ETHANEDIOL
lig 20
EDO
A
812 41,2-ETHANEDIOL
lig 21
EDO
A
813 41,2-ETHANEDIOL
lig 22
EDO
A
814 41,2-ETHANEDIOL
lig 23
EDO
A
815 41,2-ETHANEDIOL
lig 24
EDO
A
816 41,2-ETHANEDIOL
lig 25
EDO
A
817 41,2-ETHANEDIOL
lig 26
EDO
A
818 41,2-ETHANEDIOL
lig 27
EDO
A
819 41,2-ETHANEDIOL
lig 28
EDO
A
820 41,2-ETHANEDIOL