Analysis of Ligand-Protein Contacts in PDB entry:
5V4B


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 12 ligands in PDB entry 5V4B. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
C
198 11PHOSPHOTHREONINE
lig 2
SEP
C
202 10PHOSPHOSERINE
lig 3
SO4
B
2801 5SULFATE ION
lig 4
SO4
B
2802 5SULFATE ION
lig 5
SO4
B
2803 5SULFATE ION
lig 6
SO4
B
2804 5SULFATE ION
lig 7
SO4
B
2805 5SULFATE ION
lig 8
SO4
B
2806 5SULFATE ION
lig 9
SO4
B
2807 5SULFATE ION
lig 10
SO4
B
2808 5SULFATE ION
lig 11
SO4
B
2809 5SULFATE ION
lig 12
IMD
B
2810 5IMIDAZOLE