Analysis of Ligand-Protein Contacts in PDB entry:
5V5J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5V5J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
SO4
A
202 5SULFATE ION
lig 3
SO4
A
203 5SULFATE ION
lig 4
OXY
A
204 2OXYGEN MOLECULE
lig 5
GOL
A
205 6GLYCEROL
lig 6
GOL
A
206 6GLYCEROL
lig 7
GOL
A
207 6GLYCEROL
lig 8
GOL
A
208 6GLYCEROL
lig 9
GOL
A
209 6GLYCEROL
lig 10
HEM
B
201 43PROTOPORPHYRIN IX CONTAINING FE
lig 11
OXY
B
202 2OXYGEN MOLECULE
lig 12
GOL
B
203 6GLYCEROL
lig 13
GOL
B
204 6GLYCEROL