Analysis of Ligand-Protein Contacts in PDB entry:
5V62


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 9 ligands in PDB entry 5V62. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
185 11PHOSPHOTHREONINE
lig 2
PTR
A
187 16O-PHOSPHOTYROSINE
lig 3
GOL
A
401 6GLYCEROL
lig 4
GOL
A
402 6GLYCEROL
lig 5
GOL
A
403 6GLYCEROL
lig 6
GOL
A
404 6GLYCEROL
lig 7
GOL
A
405 6GLYCEROL
lig 8
FRZ
A
406 25 4-C]PYRIDAZIN-3-AMINE
lig 9
AKS
A
407 5N-(HEX-5-YN-1-YL)HEXANAMIDE