Analysis of Ligand-Protein Contacts in PDB entry:
5V8M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 153 ligands in PDB entry 5V8M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
M
7 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
N
6 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
N
7 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
N
8 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 34
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
V
5 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
V
6 11ALPHA-D-MANNOPYRANOSE
lig 37
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 40
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 41
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
d
3 11BETA-D-MANNOPYRANOSE
lig 57
MAN
d
4 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
d
5 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
d
6 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
d
7 11ALPHA-D-MANNOPYRANOSE
lig 61
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 64
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 65
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
e
6 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
e
7 11ALPHA-D-MANNOPYRANOSE
lig 68
MAN
e
8 11ALPHA-D-MANNOPYRANOSE
lig 69
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 78
MAN
i
4 11ALPHA-D-MANNOPYRANOSE
lig 79
MAN
i
5 11ALPHA-D-MANNOPYRANOSE
lig 80
MAN
i
6 11ALPHA-D-MANNOPYRANOSE
lig 81
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 84
MAN
j
4 11ALPHA-D-MANNOPYRANOSE
lig 85
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
BMA
m
3 11BETA-D-MANNOPYRANOSE
lig 92
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 93
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
BMA
q
3 11BETA-D-MANNOPYRANOSE
lig 101
MAN
q
4 11ALPHA-D-MANNOPYRANOSE
lig 102
MAN
q
5 11ALPHA-D-MANNOPYRANOSE
lig 103
MAN
q
6 11ALPHA-D-MANNOPYRANOSE
lig 104
MAN
q
7 11ALPHA-D-MANNOPYRANOSE
lig 105
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
BMA
r
3 11BETA-D-MANNOPYRANOSE
lig 108
MAN
r
4 11ALPHA-D-MANNOPYRANOSE
lig 109
MAN
r
5 11ALPHA-D-MANNOPYRANOSE
lig 110
MAN
r
6 11ALPHA-D-MANNOPYRANOSE
lig 111
MAN
r
7 11ALPHA-D-MANNOPYRANOSE
lig 112
MAN
r
8 11ALPHA-D-MANNOPYRANOSE
lig 113
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
BMA
v
3 11BETA-D-MANNOPYRANOSE
lig 122
MAN
v
4 11ALPHA-D-MANNOPYRANOSE
lig 123
MAN
v
5 11ALPHA-D-MANNOPYRANOSE
lig 124
MAN
v
6 11ALPHA-D-MANNOPYRANOSE
lig 125
NAG
w
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
NAG
w
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 127
BMA
w
3 11BETA-D-MANNOPYRANOSE
lig 128
MAN
w
4 11ALPHA-D-MANNOPYRANOSE
lig 129
NAG
x
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 130
NAG
x
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
NAG
A
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 134
NAG
A
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 135
NAG
A
633 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 136
NAG
A
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 137
NAG
A
645 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 138
NAG
B
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 139
NAG
B
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 140
NAG
F
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 141
NAG
F
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 142
NAG
F
631 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 143
NAG
F
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 144
NAG
F
645 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 145
NAG
I
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 146
NAG
I
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 147
NAG
G
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 148
NAG
G
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 149
NAG
G
633 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 150
NAG
G
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 151
NAG
G
645 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 152
NAG
J
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 153
NAG
J
702 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE