Analysis of Ligand-Protein Contacts in PDB entry:
5VA9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5VA9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
B
1 8PYROGLUTAMIC ACID
lig 3
ACE
C
0 3ACETYL GROUP
lig 4
NH2
C
19 1AMINO GROUP
lig 5
ACE
D
0 3ACETYL GROUP
lig 6
NH2
D
19 1AMINO GROUP
lig 7
CL
A
501 1CHLORIDE ION
lig 8
CA
A
502 1CALCIUM ION
lig 9
CL
B
501 1CHLORIDE ION
lig 10
CA
B
502 1CALCIUM ION