Analysis of Ligand-Protein Contacts in PDB entry:
5VBQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5VBQ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
R78
A
201 38 METHYLPIPERIDIN-4-YL)BENZAMIDE
lig 2
CL
A
202 1CHLORIDE ION
lig 3
EDO
A
203 41,2-ETHANEDIOL
lig 4
EDO
A
204 41,2-ETHANEDIOL
lig 5
EDO
A
205 41,2-ETHANEDIOL
lig 6
EDO
A
206 41,2-ETHANEDIOL
lig 7
EDO
A
207 41,2-ETHANEDIOL
lig 8
EDO
A
208 41,2-ETHANEDIOL
lig 9
EDO
A
209 41,2-ETHANEDIOL
lig 10
EDO
A
210 41,2-ETHANEDIOL
lig 11
EDO
A
211 41,2-ETHANEDIOL
lig 12
EDO
A
212 41,2-ETHANEDIOL
lig 13
R78
B
201 38 METHYLPIPERIDIN-4-YL)BENZAMIDE
lig 14
EDO
B
202 41,2-ETHANEDIOL
lig 15
EDO
B
203 41,2-ETHANEDIOL
lig 16
EDO
B
204 41,2-ETHANEDIOL
lig 17
EDO
B
205 41,2-ETHANEDIOL
lig 18
EDO
B
206 41,2-ETHANEDIOL
lig 19
EDO
B
207 41,2-ETHANEDIOL