Analysis of Ligand-Protein Contacts in PDB entry:
5VCM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5VCM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MN
A
501 1MANGANESE (II) ION
lig 2
UDP
A
502 25URIDINE-5'-DIPHOSPHATE
lig 3
DMS
A
503 4DIMETHYL SULFOXIDE
lig 4
DMS
A
504 4DIMETHYL SULFOXIDE
lig 5
EDO
A
505 41,2-ETHANEDIOL
lig 6
DMS
A
506 4DIMETHYL SULFOXIDE
lig 7
MN
B
501 1MANGANESE (II) ION
lig 8
NAG
B
502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
DMS
B
503 4DIMETHYL SULFOXIDE
lig 10
DMS
B
504 4DIMETHYL SULFOXIDE
lig 11
DMS
B
505 4DIMETHYL SULFOXIDE
lig 12
DMS
B
506 4DIMETHYL SULFOXIDE
lig 13
DMS
B
507 4DIMETHYL SULFOXIDE