Analysis of Ligand-Protein Contacts in PDB entry:
5VEG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5VEG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FMN
A
201 31FLAVIN MONONUCLEOTIDE
lig 2
CD
A
202 1CADMIUM ION
lig 3
NA
A
203 1SODIUM ION
lig 4
FMN
B
201 31FLAVIN MONONUCLEOTIDE
lig 5
CD
B
202 1CADMIUM ION
lig 6
CD
B
203 1CADMIUM ION
lig 7
NA
B
204 1SODIUM ION
lig 8
FMN
C
201 31FLAVIN MONONUCLEOTIDE
lig 9
NA
C
202 1SODIUM ION
lig 10
NA
C
203 1SODIUM ION
lig 11
NA
C
204 1SODIUM ION
lig 12
NA
C
205 1SODIUM ION