Analysis of Ligand-Protein Contacts in PDB entry:
5VEM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 5VEM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
ZN
A
501 1ZINC ION
lig 12
ZN
A
502 1ZINC ION
lig 13
ZN
A
503 1ZINC ION
lig 14
NAG
A
504 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
ZN
B
501 1ZINC ION
lig 18
ZN
B
502 1ZINC ION
lig 19
ZN
B
503 1ZINC ION
lig 20
NAG
B
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
509 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
B
510 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
ZN
C
501 1ZINC ION
lig 24
ZN
C
502 1ZINC ION
lig 25
ZN
C
503 1ZINC ION
lig 26
NAG
C
506 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
C
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE