Analysis of Ligand-Protein Contacts in PDB entry:
5VF1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5VF1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORN
A
1 8L-ORNITHINE
lig 2
PHI
A
5 12IODO-PHENYLALANINE
lig 3
ORN
A
9 8L-ORNITHINE
lig 4
MEA
A
13 12N-METHYLPHENYLALANINE
lig 5
ORN
B
1 8L-ORNITHINE
lig 6
PHI
B
5 12IODO-PHENYLALANINE
lig 7
ORN
B
9 8L-ORNITHINE
lig 8
MEA
B
13 12N-METHYLPHENYLALANINE
lig 9
ORN
C
1 8L-ORNITHINE
lig 10
PHI
C
5 12IODO-PHENYLALANINE
lig 11
ORN
C
9 8L-ORNITHINE
lig 12
MEA
C
13 12N-METHYLPHENYLALANINE
lig 13
ORN
D
1 8L-ORNITHINE
lig 14
PHI
D
5 12IODO-PHENYLALANINE
lig 15
ORN
D
9 8L-ORNITHINE
lig 16
MEA
D
13 12N-METHYLPHENYLALANINE
lig 17
ORN
E
1 8L-ORNITHINE
lig 18
PHI
E
5 12IODO-PHENYLALANINE
lig 19
ORN
E
9 8L-ORNITHINE
lig 20
MEA
E
13 12N-METHYLPHENYLALANINE
lig 21
ORN
F
1 8L-ORNITHINE
lig 22
PHI
F
5 12IODO-PHENYLALANINE
lig 23
ORN
F
9 8L-ORNITHINE
lig 24
MEA
F
13 12N-METHYLPHENYLALANINE