Analysis of Ligand-Protein Contacts in PDB entry:
5VH5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5VH5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
B
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
B
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
FUL
B
8 10BETA-L-FUCOPYRANOSE
lig 9
ZN
A
501 1ZINC ION
lig 10
ZN
A
502 1ZINC ION
lig 11
ZN
A
503 1ZINC ION
lig 12
ACT
A
504 4ACETATE ION