Analysis of Ligand-Protein Contacts in PDB entry:
5VJ9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5VJ9. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAI
A
101 4GUANIDINE
lig 2
SPM
A
102 14SPERMINE
lig 3
GAI
B
101 4GUANIDINE
lig 4
MG
B
102 1MAGNESIUM ION
lig 5
SPM
B
103 10SPERMINE
lig 6
SPM
B
104 8SPERMINE
lig 7
GAI
C
101 4GUANIDINE
lig 8
SPM
C
102 14SPERMINE
lig 9
GAI
D
101 4GUANIDINE
lig 10
SPM
D
102 14SPERMINE
lig 11
K
D
103 1POTASSIUM ION