Analysis of Ligand-Protein Contacts in PDB entry:
5VJL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 5 ligands in PDB entry 5VJL. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SIA
A
3001 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 2
MOH
A
3002 2METHANOL
lig 3
NAG
A
3003 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
3004 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
B
201 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE