Analysis of Ligand-Protein Contacts in PDB entry:
5VK1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5VK1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ACE
B
0 3ACETYL GROUP
lig 2
9E7
B
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 3
NH2
B
13 1AMINO GROUP
lig 4
ACE
D
0 3ACETYL GROUP
lig 5
9E7
D
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 6
NH2
D
13 1AMINO GROUP
lig 7
ACE
F
0 3ACETYL GROUP
lig 8
9E7
F
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 9
ACE
H
0 3ACETYL GROUP
lig 10
9E7
H
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 11
ACE
J
0 3ACETYL GROUP
lig 12
9E7
J
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 13
NH2
J
13 1AMINO GROUP
lig 14
ACE
L
0 3ACETYL GROUP
lig 15
9E7
L
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 16
ACE
N
0 3ACETYL GROUP
lig 17
9E7
N
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE
lig 18
ACE
P
0 3ACETYL GROUP
lig 19
9E7
P
4 11N~6~-(SULFANYLMETHYL)-L-LYSINE