Analysis of Ligand-Protein Contacts in PDB entry:
5VLI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 5VLI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 6
NAG
A
403 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
PGF
A
404 132,5,8,11-TETRAOXATRIDECANE
lig 8
PEG
B
704 7DI(HYDROXYETHYL)ETHER
lig 9
PEG
B
705 7DI(HYDROXYETHYL)ETHER
lig 10
PEG
C
101 7DI(HYDROXYETHYL)ETHER