Analysis of Ligand-Protein Contacts in PDB entry:
5VNB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5VNB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ALY
K
23 12N(6)-ACETYLLYSINE
lig 2
ALY
K
27 12N(6)-ACETYLLYSINE
lig 3
EDO
A
201 41,2-ETHANEDIOL
lig 4
SO4
A
202 5SULFATE ION
lig 5
EDO
B
201 41,2-ETHANEDIOL
lig 6
EDO
B
202 41,2-ETHANEDIOL
lig 7
EDO
B
203 41,2-ETHANEDIOL
lig 8
EDO
B
204 41,2-ETHANEDIOL
lig 9
EDO
B
205 41,2-ETHANEDIOL
lig 10
EDO
B
206 41,2-ETHANEDIOL
lig 11
SO4
B
207 4SULFATE ION
lig 12
SO4
B
208 5SULFATE ION
lig 13
SO4
B
209 5SULFATE ION
lig 14
SO4
C
201 5SULFATE ION