Analysis of Ligand-Protein Contacts in PDB entry:
5VOF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5VOF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CFL
A
6 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 2
CFL
A
7 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 3
CFL
A
8 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 4
CFL
A
9 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 5
CFL
A
12 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 6
UFT
A
17 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 7
UFT
A
20 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
CFL
A
22 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 9
UFT
A
23 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 10
UFT
A
24 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 11
CFL
A
27 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 12
CFL
A
28 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 13
CFL
A
29 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 14
CFL
A
30 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 15
CFL
A
32 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 16
UFT
A
33 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 17
CFL
A
34 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 18
UFT
A
35 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 19
UFT
A
36 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 20
RIV
H
301 29 CARBOXAMIDE
lig 21
NA
H
302 1SODIUM ION
lig 22
CA
H
303 1CALCIUM ION
lig 23
MG
A
101 1MAGNESIUM ION
lig 24
MG
A
102 1MAGNESIUM ION