Analysis of Ligand-Protein Contacts in PDB entry:
5VRZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5VRZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
8OG
T
7 238-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
lig 2
TTP
P
101 29THYMIDINE-5'-TRIPHOSPHATE
lig 3
MG
P
102 1MAGNESIUM ION
lig 4
MG
P
103 1MAGNESIUM ION
lig 5
MG
P
104 1MAGNESIUM ION
lig 6
MG
P
105 1MAGNESIUM ION
lig 7
MG
P
106 1MAGNESIUM ION
lig 8
PPV
P
107 9PYROPHOSPHATE
lig 9
NA
D
101 1SODIUM ION
lig 10
CL
A
401 1CHLORIDE ION
lig 11
CL
A
402 1CHLORIDE ION
lig 12
IMD
A
403 5IMIDAZOLE
lig 13
IMD
A
404 5IMIDAZOLE