Analysis of Ligand-Protein Contacts in PDB entry:
5VS3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 5VS3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
8OG
T
7 238-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
lig 2
MG
T
101 1MAGNESIUM ION
lig 3
TTP
P
101 29THYMIDINE-5'-TRIPHOSPHATE
lig 4
MG
P
102 1MAGNESIUM ION
lig 5
MG
P
103 1MAGNESIUM ION
lig 6
MG
P
104 1MAGNESIUM ION
lig 7
MG
P
105 1MAGNESIUM ION
lig 8
PPV
P
106 9PYROPHOSPHATE
lig 9
MG
D
101 1MAGNESIUM ION
lig 10
ACT
A
401 4ACETATE ION
lig 11
ACT
A
402 4ACETATE ION
lig 12
ACT
A
403 4ACETATE ION
lig 13
NA
A
404 1SODIUM ION