Analysis of Ligand-Protein Contacts in PDB entry:
5VSA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 5VSA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
137 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
137 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
137 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
137 12LYSINE NZ-CARBOXYLIC ACID
lig 5
FE2
A
401 1FE (II) ION
lig 6
CO
A
402 1COBALT (II) ION
lig 7
GOL
A
403 6GLYCEROL
lig 8
GOL
A
404 6GLYCEROL
lig 9
GOL
A
405 6GLYCEROL
lig 10
FE2
B
401 1FE (II) ION
lig 11
CO
B
402 1COBALT (II) ION
lig 12
GOL
B
403 6GLYCEROL
lig 13
GOL
B
404 6GLYCEROL
lig 14
FE2
C
401 1FE (II) ION
lig 15
CO
C
402 1COBALT (II) ION
lig 16
GOL
C
403 6GLYCEROL
lig 17
GOL
C
404 6GLYCEROL
lig 18
FE2
D
401 1FE (II) ION
lig 19
CO
D
402 1COBALT (II) ION
lig 20
GOL
D
403 6GLYCEROL