Analysis of Ligand-Protein Contacts in PDB entry:
5VTA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 5VTA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
A
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
805 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
PG4
A
806 13TETRAETHYLENE GLYCOL
lig 7
PEG
A
807 7DI(HYDROXYETHYL)ETHER
lig 8
PEG
A
808 7DI(HYDROXYETHYL)ETHER
lig 9
EDO
A
809 41,2-ETHANEDIOL
lig 10
EDO
A
810 41,2-ETHANEDIOL
lig 11
EDO
A
811 41,2-ETHANEDIOL
lig 12
EDO
A
812 41,2-ETHANEDIOL
lig 13
9K4
A
813 43 HEXAOXA-21-AZATRICOSAN-1-YL)ACETAMIDE
lig 14
NAG
B
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
B
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
B
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
B
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
EDO
B
805 41,2-ETHANEDIOL
lig 19
9K4
B
806 49 HEXAOXA-21-AZATRICOSAN-1-YL)ACETAMIDE
lig 20
NAG
C
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
C
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
C
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
C
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
C
805 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
C
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
EDO
C
807 41,2-ETHANEDIOL
lig 27
EDO
C
808 41,2-ETHANEDIOL
lig 28
EDO
C
809 41,2-ETHANEDIOL
lig 29
EDO
C
810 41,2-ETHANEDIOL
lig 30
EDO
C
811 41,2-ETHANEDIOL
lig 31
9K4
C
812 40 HEXAOXA-21-AZATRICOSAN-1-YL)ACETAMIDE
lig 32
NAG
D
801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
D
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
D
803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
D
804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
D
805 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
D
806 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
PEG
D
807 7DI(HYDROXYETHYL)ETHER
lig 39
9K4
D
808 49 HEXAOXA-21-AZATRICOSAN-1-YL)ACETAMIDE