Analysis of Ligand-Protein Contacts in PDB entry:
5VU0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 36 ligands in PDB entry 5VU0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
D
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
E
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
GAL
E
6 11BETA-D-GALACTOPYRANOSE
lig 15
MAN
E
7 11ALPHA-D-MANNOPYRANOSE
lig 16
NAG
E
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
EDO
A
1009 41,2-ETHANEDIOL
lig 18
EDO
A
1010 41,2-ETHANEDIOL
lig 19
PEG
A
1011 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
A
1012 7DI(HYDROXYETHYL)ETHER
lig 21
PEG
A
1013 7DI(HYDROXYETHYL)ETHER
lig 22
NA
A
1014 1SODIUM ION
lig 23
NA
A
1015 1SODIUM ION
lig 24
NA
A
1016 1SODIUM ION
lig 25
NA
A
1017 1SODIUM ION
lig 26
NA
A
1018 1SODIUM ION
lig 27
EDO
B
1009 41,2-ETHANEDIOL
lig 28
PEG
B
1010 7DI(HYDROXYETHYL)ETHER
lig 29
NA
B
1011 1SODIUM ION
lig 30
NA
B
1012 1SODIUM ION
lig 31
NA
B
1013 1SODIUM ION
lig 32
NA
B
1014 1SODIUM ION
lig 33
NAG
C
201 122-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
C
202 122-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
EDO
C
203 41,2-ETHANEDIOL
lig 36
EDO
C
204 41,2-ETHANEDIOL