Analysis of Ligand-Protein Contacts in PDB entry:
5VY7


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 42 ligands in PDB entry 5VY7. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
0DG
A
1 172'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 2
0DA
A
2 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 3
0DG
A
3 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 4
0DC
A
4 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 5
0DA
A
5 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 6
0DG
A
6 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 7
0DA
A
7 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 8
0DC
A
8 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 9
0DC
A
9 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 10
0DT
A
10 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 11
0DG
A
11 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 12
0DA
A
12 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 13
0DC
A
13 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 14
0DG
A
14 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 15
0DG
A
15 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 16
0DA
A
16 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 17
0DA
A
17 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 18
0DC
A
18 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 19
0DT
A
19 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 20
0DC
A
20 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 21
0DA
A
21 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 22
0DC
B
0 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 23
0DC
B
1 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 24
0DG
B
2 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 25
0DT
B
3 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 26
0DC
B
4 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 27
0DA
B
5 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 28
0DT
C
1 152'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 29
0DC
C
2 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 30
0DT
C
3 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 31
0DG
C
4 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 32
0DA
C
5 212'-DEOXY-L-RIBO-FURANOSYL ADENOSINE-5'-MON
lig 33
0DG
C
6 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 34
0DT
C
7 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 35
0DT
C
8 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 36
0DG
D
10 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 37
0DG
D
11 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 38
0DT
D
12 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 39
0DC
D
13 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO
lig 40
0DT
D
14 202'-DEOXY-L-RIBO-FURANOSYL THYMIDINE-5'-MON
lig 41
0DG
D
15 222'-DEOXY-L-RIBO-FURANOSYL GUANINE-5'-MONOP
lig 42
0DC
D
16 192'-DEOXY-L-RIBO-FURANOSYL CYTOSINE-5'-MONO